Respiratory Virus (Unspecified) Identification (Secondary Care)
Codelist metadata
-
Coding system
- ICD-10
-
Coding system release
- 2019-covid-expanded
-
Organisation
- OpenSAFELY
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Codelist ID
- opensafely/respiratory-virus-unspecified-identification-secondary-care
-
Version ID
- 4d1c083b
Versions
About
Description
Codelist for identifying repsiratory infections in secondary care which have no identified pathogen. For additional case identification in older adults, COPD and Asthma exacerbations can be recorded as cases (see references).
Methodology
Codelist checked by Jennifer Quint. To see full outcome phenotypes see Github issue in references
References
Signed off by
- Em Prestige, (Aug. 14, 2024)
Codelists are developed by a broad community of users for individual study purposes, which may or may not meet the needs of other studies. They should not be thought of as universal definitions of a particular condition.
We don't offer any guarantees about what they do or don't identify. Users should carefully check that any codelist meets their needs, and seek clinical input where appropriate.
| code | term |
|---|---|
| J01 | Acute sinusitis |
| J010 | Acute maxillary sinusitis |
| J011 | Acute frontal sinusitis |
| J012 | Acute ethmoidal sinusitis |
| J013 | Acute sphenoidal sinusitis |
| J014 | Acute pansinusitis |
| J018 | Other acute sinusitis |
| J019 | Acute sinusitis, unspecified |
| J03 | Acute tonsillitis |
| J039 | Acute tonsillitis, unspecified |
| J04 | Acute laryngitis and tracheitis |
| J040 | Acute laryngitis |
| J041 | Acute tracheitis |
| J042 | Acute laryngotracheitis |
| J05 | Acute obstructive laryngitis [croup] and epiglottitis |
| J050 | Acute obstructive laryngitis [croup] |
| J051 | Acute epiglottitis |
| J12 | Viral pneumonia, not elsewhere classified |
| J128 | Other viral pneumonia |
| J129 | Viral pneumonia, unspecified |
| J16 | Pneumonia due to other infectious organisms, not elsewhere classified |
| J168 | Pneumonia due to other specified infectious organisms |
| J17 | Pneumonia in diseases classified elsewhere |
| J171 | Pneumonia in viral diseases classified elsewhere |
| J178 | Pneumonia in other diseases classified elsewhere |
| J180 | Bronchopneumonia, unspecified |
| J181 | Lobar pneumonia, unspecified |
| J189 | Pneumonia, unspecified |
| J20 | Acute bronchitis |
| J208 | Acute bronchitis due to other specified organisms |
| J209 | Acute bronchitis, unspecified |
| J40 | Bronchitis, not specified as acute or chronic |
| J851 | Abscess of lung with pneumonia |
Codes not in the full codelist are in faint grey.
This page shows the search terms that were used to build the codelist. Concepts that match the search terms, but which were excluded, are in faint grey.
bronchitis
Included 4 out of 18 matching concepts.
Show matching concepts
-
Acute bronchitis (
J20) -
Acute bronchitis due to Haemophilus influenzae (
J201) -
Acute bronchitis due to Mycoplasma pneumoniae (
J200) -
Acute bronchitis due to coxsackievirus (
J203) -
Acute bronchitis due to echovirus (
J207) -
Acute bronchitis due to other specified organisms (
J208) -
Acute bronchitis due to parainfluenza virus (
J204) -
Acute bronchitis due to respiratory syncytial virus (
J205) -
Acute bronchitis due to rhinovirus (
J206) -
Acute bronchitis due to streptococcus (
J202) -
Acute bronchitis, unspecified (
J209) -
Bronchitis and pneumonitis due to chemicals, gases, fumes and vapours (
J680) -
Bronchitis, not specified as acute or chronic (
J40) -
Mixed simple and mucopurulent chronic bronchitis (
J418) -
Mucopurulent chronic bronchitis (
J411) -
Simple and mucopurulent chronic bronchitis (
J41) -
Simple chronic bronchitis (
J410) -
Unspecified chronic bronchitis (
J42)
laryngitis
Included 7 out of 10 matching concepts.
Show matching concepts
-
Acute epiglottitis (
J051) -
Acute laryngitis (
J040) -
Acute laryngitis and tracheitis (
J04) -
Acute laryngotracheitis (
J042) -
Acute obstructive laryngitis [croup] (
J050) -
Acute obstructive laryngitis [croup] and epiglottitis (
J05) -
Acute tracheitis (
J041) -
Chronic laryngitis (
J370) -
Chronic laryngitis and laryngotracheitis (
J37) -
Chronic laryngotracheitis (
J371)
pneumonia
Included 12 out of 57 matching concepts.
Show matching concepts
-
Abscess of lung with pneumonia (
J851) -
Abscess of lung without pneumonia (
J852) -
Acute bronchitis due to Mycoplasma pneumoniae (
J200) -
Adenoviral pneumonia (
J120) -
Bacterial pneumonia, not elsewhere classified (
J15) -
Bacterial pneumonia, unspecified (
J159) -
Bronchopneumonia, unspecified (
J180) -
Chlamydial pneumonia (
J160) -
Congenital pneumonia (
P23) -
Congenital pneumonia due to Chlamydia (
P231) -
Congenital pneumonia due to Escherichia coli (
P234) -
Congenital pneumonia due to Pseudomonas (
P235) -
Congenital pneumonia due to other bacterial agents (
P236) -
Congenital pneumonia due to other organisms (
P238) -
Congenital pneumonia due to staphylococcus (
P232) -
Congenital pneumonia due to streptococcus, group B (
P233) -
Congenital pneumonia due to viral agent (
P230) -
Congenital pneumonia, unspecified (
P239) -
HIV disease resulting in Pneumocystis jirovecii pneumonia (
B206) -
Human metapneumovirus pneumonia (
J123) -
Hypostatic pneumonia, unspecified (
J182) -
Influenza with pneumonia, seasonal influenza virus identified (
J100) -
Influenza with pneumonia, virus not identified (
J110) -
Klebsiella pneumoniae [K. pneumoniae] as the cause of diseases classified to other chapters (
B961) -
Lobar pneumonia, unspecified (
J181) -
Measles complicated by pneumonia J17.1 (
B052) -
Mycoplasma pneumoniae [M. pneumoniae] as the cause of diseases classified to other chapters (
B960) -
Other bacterial pneumonia (
J158) -
Other pneumonia, organism unspecified (
J188) -
Other viral pneumonia (
J128) -
Parainfluenza virus pneumonia (
J122) -
Pneumonia due to Escherichia coli (
J155) -
Pneumonia due to Haemophilus influenzae (
J14) -
Pneumonia due to Klebsiella pneumoniae (
J150) -
Pneumonia due to Mycoplasma pneumoniae (
J157) -
Pneumonia due to Pseudomonas (
J151) -
Pneumonia due to Streptococcus pneumoniae (
J13) -
Pneumonia due to other Gram-negative bacteria (
J156) -
Pneumonia due to other infectious organisms, not elsewhere classified (
J16) -
Pneumonia due to other specified infectious organisms (
J168) -
Pneumonia due to other streptococci (
J154) -
Pneumonia due to staphylococcus (
J152) -
Pneumonia due to streptococcus, group B (
J153) -
Pneumonia in bacterial diseases classified elsewhere (
J170) -
Pneumonia in diseases classified elsewhere (
J17) -
Pneumonia in mycoses (
J172) -
Pneumonia in other diseases classified elsewhere (
J178) -
Pneumonia in parasitic diseases (
J173) -
Pneumonia in viral diseases classified elsewhere (
J171) -
Pneumonia, organism unspecified (
J18) -
Pneumonia, unspecified (
J189) -
Respiratory syncytial virus pneumonia (
J121) -
Sepsis due to Streptococcus pneumoniae (
A403) -
Streptococcus pneumoniae as the cause of diseases classified to other chapters (
B953) -
Varicella pneumonia J17.1 (
B012) -
Viral pneumonia, not elsewhere classified (
J12) -
Viral pneumonia, unspecified (
J129)
sinusitis
Included 8 out of 16 matching concepts.
Show matching concepts
-
Acute ethmoidal sinusitis (
J012) -
Acute frontal sinusitis (
J011) -
Acute maxillary sinusitis (
J010) -
Acute pansinusitis (
J014) -
Acute sinusitis (
J01) -
Acute sinusitis, unspecified (
J019) -
Acute sphenoidal sinusitis (
J013) -
Chronic ethmoidal sinusitis (
J322) -
Chronic frontal sinusitis (
J321) -
Chronic maxillary sinusitis (
J320) -
Chronic pansinusitis (
J324) -
Chronic sinusitis (
J32) -
Chronic sinusitis, unspecified (
J329) -
Chronic sphenoidal sinusitis (
J323) -
Other acute sinusitis (
J018) -
Other chronic sinusitis (
J328)
tonsillitis
Included 2 out of 6 matching concepts.
Show matching concepts
-
Acute tonsillitis (
J03) -
Acute tonsillitis due to other specified organisms (
J038) -
Acute tonsillitis, unspecified (
J039) -
Chronic tonsillitis (
J350) -
Herpesviral gingivostomatitis and pharyngotonsillitis (
B002) -
Streptococcal tonsillitis (
J030)