Respiratory Virus (Unspecified) Exclusion (Secondary Care)

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Coding system
ICD-10
Coding system release
2019-covid-expanded
Organisation
OpenSAFELY
Codelist ID
opensafely/respiratory-virus-unspecified-exclusion-secondary-care
Version ID
0fd37cb0
Versions
  • 0fd37cb0

Description

Codelist created to be used in conjuction with relevant inclusion criteria, with the aim of excluding conditions due to pathogens which are not of interest when comparing RSV, COVID-19, and Influenza

Methodology

Codelist checked by Jennifer Quint. To see full outcome phenotypes see Github issue in references

References

Signed off by

  • Em Prestige, (Aug. 14, 2024)

Codelists are developed by a broad community of users for individual study purposes, which may or may not meet the needs of other studies. They should not be thought of as universal definitions of a particular condition.

We don't offer any guarantees about what they do or don't identify. Users should carefully check that any codelist meets their needs, and seek clinical input where appropriate.

code term
A37 Whooping cough
A370 Whooping cough due to Bordetella pertussis
A371 Whooping cough due to Bordetella parapertussis
A378 Whooping cough due to other Bordetella species
A379 Whooping cough, unspecified
B300 Keratoconjunctivitis due to adenovirus H19.2
B301 Conjunctivitis due to adenovirus H13.1
B340 Adenovirus infection, unspecified site
B341 Enterovirus infection, unspecified site
B960 Mycoplasma pneumoniae [M. pneumoniae] as the cause of diseases classified to other chapters
B970 Adenovirus as the cause of diseases classified to other chapters
B971 Enterovirus as the cause of diseases classified to other chapters
J122 Parainfluenza virus pneumonia
J123 Human metapneumovirus pneumonia
J157 Pneumonia due to Mycoplasma pneumoniae
J200 Acute bronchitis due to Mycoplasma pneumoniae
J204 Acute bronchitis due to parainfluenza virus
J206 Acute bronchitis due to rhinovirus
J211 Acute bronchiolitis due to human metapneumovirus

Codes not in the full codelist are in faint grey.

This page shows the search terms that were used to build the codelist. Concepts that match the search terms, but which were excluded, are in faint grey.

Mycoplasma pneumonia

Included 3 out of 3 matching concepts.

Show matching concepts
  • Acute bronchitis due to Mycoplasma pneumoniae (J200)
  • Mycoplasma pneumoniae [M. pneumoniae] as the cause of diseases classified to other chapters (B960)
  • Pneumonia due to Mycoplasma pneumoniae (J157)

Mycoplasmal pneumonia

Included 0 out of 0 matching concepts.

Show matching concepts

adenovirus

Included 4 out of 4 matching concepts.

Show matching concepts
  • Adenovirus as the cause of diseases classified to other chapters (B970)
  • Adenovirus infection, unspecified site (B340)
  • Conjunctivitis due to adenovirus H13.1 (B301)
  • Keratoconjunctivitis due to adenovirus H19.2 (B300)

enterovirus

Included 2 out of 2 matching concepts.

Show matching concepts
  • Enterovirus as the cause of diseases classified to other chapters (B971)
  • Enterovirus infection, unspecified site (B341)

metapneumovirus

Included 2 out of 2 matching concepts.

Show matching concepts
  • Acute bronchiolitis due to human metapneumovirus (J211)
  • Human metapneumovirus pneumonia (J123)

parainfluenza

Included 2 out of 2 matching concepts.

Show matching concepts
  • Acute bronchitis due to parainfluenza virus (J204)
  • Parainfluenza virus pneumonia (J122)

pertussis

Included 2 out of 8 matching concepts.

Show matching concepts
  • Mixed bacterial vaccines, except combinations with a pertussis component (Y588)
  • Need for immunization against diphtheria-tetanus-pertussis with poliomyelitis [DTP + polio] (Z273)
  • Need for immunization against diphtheria-tetanus-pertussis with typhoid-paratyphoid [DTP + TAB] (Z272)
  • Need for immunization against diphtheria-tetanus-pertussis, combined [DTP] (Z271)
  • Need for immunization against pertussis alone (Z237)
  • Pertussis vaccine, including combinations with a pertussis component (Y586)
  • Whooping cough due to Bordetella parapertussis (A371)
  • Whooping cough due to Bordetella pertussis (A370)

rhinovirus

Included 1 out of 1 matching concepts.

Show matching concepts
  • Acute bronchitis due to rhinovirus (J206)

whooping cough

Included 5 out of 5 matching concepts.

Show matching concepts
  • Whooping cough (A37)
  • Whooping cough due to Bordetella parapertussis (A371)
  • Whooping cough due to Bordetella pertussis (A370)
  • Whooping cough due to other Bordetella species (A378)
  • Whooping cough, unspecified (A379)