COVID-19 Exclusion (Secondary Care) - Maximal Sensitivity

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Codelist metadata

Coding system

ICD-10

Coding system release

2019-covid-expanded

Organisation

OpenSAFELY

Codelist ID

opensafely/covid-19-exclusion-secondary-care-maximal-sensitivity

Version ID

1fa5572b

Versions

  • 1fa5572b Updated: 2024-04-22 10:47:56

About

Methodology

To be used in conjunction with COVID-19 inclusion criteria. Codelist derived from exclusion codelists for RSV (checked by Jennifer Quint) and Influenza (checked by Charlotte Warren-Gash), see references. To see full outcome phenotypes see Github issue in references

References

Signed off by

  • Em Prestige, (Aug. 14, 2024)

Codelists are developed by a broad community of users for individual study purposes, which may or may not meet the needs of other studies. They should not be thought of as universal definitions of a particular condition.

We don't offer any guarantees about what they do or don't identify. Users should carefully check that any codelist meets their needs, and seek clinical input where appropriate.

code term
B052 Measles complicated by pneumonia J17.1
B300 Keratoconjunctivitis due to adenovirus H19.2
B301 Conjunctivitis due to adenovirus H13.1
B340 Adenovirus infection, unspecified site
B341 Enterovirus infection, unspecified site
B960 Mycoplasma pneumoniae [M. pneumoniae] as the cause of diseases classified to other chapters
B970 Adenovirus as the cause of diseases classified to other chapters
B971 Enterovirus as the cause of diseases classified to other chapters
B974 Respiratory syncytial virus as the cause of diseases classified to other chapters
J01 Acute sinusitis
J010 Acute maxillary sinusitis
J011 Acute frontal sinusitis
J012 Acute ethmoidal sinusitis
J013 Acute sphenoidal sinusitis
J014 Acute pansinusitis
J018 Other acute sinusitis
J019 Acute sinusitis, unspecified
J03 Acute tonsillitis
J038 Acute tonsillitis due to other specified organisms
J039 Acute tonsillitis, unspecified
J04 Acute laryngitis and tracheitis
J040 Acute laryngitis
J041 Acute tracheitis
J042 Acute laryngotracheitis
J05 Acute obstructive laryngitis [croup] and epiglottitis
J050 Acute obstructive laryngitis [croup]
J051 Acute epiglottitis
J09 Influenza due to identified zoonotic or pandemic influenza virus
J10 Influenza due to identified seasonal influenza virus
J100 Influenza with pneumonia, seasonal influenza virus identified
J101 Influenza with other respiratory manifestations, seasonal influenza virus identified
J108 Influenza with other manifestations, seasonal influenza virus identified
J11 Influenza, virus not identified
J110 Influenza with pneumonia, virus not identified
J111 Influenza with other respiratory manifestations, virus not identified
J118 Influenza with other manifestations, virus not identified
J12 Viral pneumonia, not elsewhere classified
J120 Adenoviral pneumonia
J121 Respiratory syncytial virus pneumonia
J122 Parainfluenza virus pneumonia
J123 Human metapneumovirus pneumonia
J128 Other viral pneumonia
J129 Viral pneumonia, unspecified
J157 Pneumonia due to Mycoplasma pneumoniae
J16 Pneumonia due to other infectious organisms, not elsewhere classified
J168 Pneumonia due to other specified infectious organisms
J17 Pneumonia in diseases classified elsewhere
J171 Pneumonia in viral diseases classified elsewhere
J178 Pneumonia in other diseases classified elsewhere
J18 Pneumonia, organism unspecified
J180 Bronchopneumonia, unspecified
J181 Lobar pneumonia, unspecified
J182 Hypostatic pneumonia, unspecified
J188 Other pneumonia, organism unspecified
J189 Pneumonia, unspecified
J20 Acute bronchitis
J200 Acute bronchitis due to Mycoplasma pneumoniae
J202 Acute bronchitis due to streptococcus
J203 Acute bronchitis due to coxsackievirus
J204 Acute bronchitis due to parainfluenza virus
J205 Acute bronchitis due to respiratory syncytial virus
J206 Acute bronchitis due to rhinovirus
J207 Acute bronchitis due to echovirus
J208 Acute bronchitis due to other specified organisms
J209 Acute bronchitis, unspecified
J210 Acute bronchiolitis due to respiratory syncytial virus
J211 Acute bronchiolitis due to human metapneumovirus
J40 Bronchitis, not specified as acute or chronic
J851 Abscess of lung with pneumonia
P23 Congenital pneumonia
P230 Congenital pneumonia due to viral agent
P238 Congenital pneumonia due to other organisms
P239 Congenital pneumonia, unspecified

Codes not in the full codelist are in faint grey.

This page shows the search terms that were used to build the codelist. Concepts that match the search terms, but which were excluded, are in faint grey.

adenovirus

Included 4 out of 4 matching concepts.

Show matching concepts
  • Adenovirus as the cause of diseases classified to other chapters (B970)
  • Adenovirus infection, unspecified site (B340)
  • Conjunctivitis due to adenovirus H13.1 (B301)
  • Keratoconjunctivitis due to adenovirus H19.2 (B300)

bronchitis

Included 11 out of 18 matching concepts.

Show matching concepts
  • Acute bronchitis (J20)
  • Acute bronchitis due to Haemophilus influenzae (J201)
  • Acute bronchitis due to Mycoplasma pneumoniae (J200)
  • Acute bronchitis due to coxsackievirus (J203)
  • Acute bronchitis due to echovirus (J207)
  • Acute bronchitis due to other specified organisms (J208)
  • Acute bronchitis due to parainfluenza virus (J204)
  • Acute bronchitis due to respiratory syncytial virus (J205)
  • Acute bronchitis due to rhinovirus (J206)
  • Acute bronchitis due to streptococcus (J202)
  • Acute bronchitis, unspecified (J209)
  • Bronchitis and pneumonitis due to chemicals, gases, fumes and vapours (J680)
  • Bronchitis, not specified as acute or chronic (J40)
  • Mixed simple and mucopurulent chronic bronchitis (J418)
  • Mucopurulent chronic bronchitis (J411)
  • Simple and mucopurulent chronic bronchitis (J41)
  • Simple chronic bronchitis (J410)
  • Unspecified chronic bronchitis (J42)

enterovirus

Included 2 out of 2 matching concepts.

Show matching concepts
  • Enterovirus as the cause of diseases classified to other chapters (B971)
  • Enterovirus infection, unspecified site (B341)

influenz

Included 11 out of 17 matching concepts.

Show matching concepts
  • Acute bronchitis due to Haemophilus influenzae (J201)
  • Acute bronchitis due to parainfluenza virus (J204)
  • Haemophilus influenzae [H. influenzae] as the cause of diseases classified to other chapters (B963)
  • Haemophilus influenzae infection, unspecified site (A492)
  • Influenza due to identified seasonal influenza virus (J10)
  • Influenza due to identified zoonotic or pandemic influenza virus (J09)
  • Influenza with other manifestations, seasonal influenza virus identified (J108)
  • Influenza with other manifestations, virus not identified (J118)
  • Influenza with other respiratory manifestations, seasonal influenza virus identified (J101)
  • Influenza with other respiratory manifestations, virus not identified (J111)
  • Influenza with pneumonia, seasonal influenza virus identified (J100)
  • Influenza with pneumonia, virus not identified (J110)
  • Influenza, virus not identified (J11)
  • Need for immunization against influenza (Z251)
  • Parainfluenza virus pneumonia (J122)
  • Pneumonia due to Haemophilus influenzae (J14)
  • Sepsis due to Haemophilus influenzae (A413)

laryngitis

Included 7 out of 10 matching concepts.

Show matching concepts
  • Acute epiglottitis (J051)
  • Acute laryngitis (J040)
  • Acute laryngitis and tracheitis (J04)
  • Acute laryngotracheitis (J042)
  • Acute obstructive laryngitis [croup] (J050)
  • Acute obstructive laryngitis [croup] and epiglottitis (J05)
  • Acute tracheitis (J041)
  • Chronic laryngitis (J370)
  • Chronic laryngitis and laryngotracheitis (J37)
  • Chronic laryngotracheitis (J371)

metapneumovirus

Included 2 out of 2 matching concepts.

Show matching concepts
  • Acute bronchiolitis due to human metapneumovirus (J211)
  • Human metapneumovirus pneumonia (J123)

mycoplasma

Included 3 out of 4 matching concepts.

Show matching concepts
  • Acute bronchitis due to Mycoplasma pneumoniae (J200)
  • Mycoplasma infection, unspecified site (A493)
  • Mycoplasma pneumoniae [M. pneumoniae] as the cause of diseases classified to other chapters (B960)
  • Pneumonia due to Mycoplasma pneumoniae (J157)

parainfluenza

Included 2 out of 2 matching concepts.

Show matching concepts
  • Acute bronchitis due to parainfluenza virus (J204)
  • Parainfluenza virus pneumonia (J122)

pneumonia

Included 29 out of 57 matching concepts.

Show matching concepts
  • Abscess of lung with pneumonia (J851)
  • Abscess of lung without pneumonia (J852)
  • Acute bronchitis due to Mycoplasma pneumoniae (J200)
  • Adenoviral pneumonia (J120)
  • Bacterial pneumonia, not elsewhere classified (J15)
  • Bacterial pneumonia, unspecified (J159)
  • Bronchopneumonia, unspecified (J180)
  • Chlamydial pneumonia (J160)
  • Congenital pneumonia (P23)
  • Congenital pneumonia due to Chlamydia (P231)
  • Congenital pneumonia due to Escherichia coli (P234)
  • Congenital pneumonia due to Pseudomonas (P235)
  • Congenital pneumonia due to other bacterial agents (P236)
  • Congenital pneumonia due to other organisms (P238)
  • Congenital pneumonia due to staphylococcus (P232)
  • Congenital pneumonia due to streptococcus, group B (P233)
  • Congenital pneumonia due to viral agent (P230)
  • Congenital pneumonia, unspecified (P239)
  • HIV disease resulting in Pneumocystis jirovecii pneumonia (B206)
  • Human metapneumovirus pneumonia (J123)
  • Hypostatic pneumonia, unspecified (J182)
  • Influenza with pneumonia, seasonal influenza virus identified (J100)
  • Influenza with pneumonia, virus not identified (J110)
  • Klebsiella pneumoniae [K. pneumoniae] as the cause of diseases classified to other chapters (B961)
  • Lobar pneumonia, unspecified (J181)
  • Measles complicated by pneumonia J17.1 (B052)
  • Mycoplasma pneumoniae [M. pneumoniae] as the cause of diseases classified to other chapters (B960)
  • Other bacterial pneumonia (J158)
  • Other pneumonia, organism unspecified (J188)
  • Other viral pneumonia (J128)
  • Parainfluenza virus pneumonia (J122)
  • Pneumonia due to Escherichia coli (J155)
  • Pneumonia due to Haemophilus influenzae (J14)
  • Pneumonia due to Klebsiella pneumoniae (J150)
  • Pneumonia due to Mycoplasma pneumoniae (J157)
  • Pneumonia due to Pseudomonas (J151)
  • Pneumonia due to Streptococcus pneumoniae (J13)
  • Pneumonia due to other Gram-negative bacteria (J156)
  • Pneumonia due to other infectious organisms, not elsewhere classified (J16)
  • Pneumonia due to other specified infectious organisms (J168)
  • Pneumonia due to other streptococci (J154)
  • Pneumonia due to staphylococcus (J152)
  • Pneumonia due to streptococcus, group B (J153)
  • Pneumonia in bacterial diseases classified elsewhere (J170)
  • Pneumonia in diseases classified elsewhere (J17)
  • Pneumonia in mycoses (J172)
  • Pneumonia in other diseases classified elsewhere (J178)
  • Pneumonia in parasitic diseases (J173)
  • Pneumonia in viral diseases classified elsewhere (J171)
  • Pneumonia, organism unspecified (J18)
  • Pneumonia, unspecified (J189)
  • Respiratory syncytial virus pneumonia (J121)
  • Sepsis due to Streptococcus pneumoniae (A403)
  • Streptococcus pneumoniae as the cause of diseases classified to other chapters (B953)
  • Varicella pneumonia J17.1 (B012)
  • Viral pneumonia, not elsewhere classified (J12)
  • Viral pneumonia, unspecified (J129)

respiratory syncytial virus

Included 4 out of 4 matching concepts.

Show matching concepts
  • Acute bronchiolitis due to respiratory syncytial virus (J210)
  • Acute bronchitis due to respiratory syncytial virus (J205)
  • Respiratory syncytial virus as the cause of diseases classified to other chapters (B974)
  • Respiratory syncytial virus pneumonia (J121)

rhinovirus

Included 1 out of 1 matching concepts.

Show matching concepts
  • Acute bronchitis due to rhinovirus (J206)

sinusitis

Included 8 out of 16 matching concepts.

Show matching concepts
  • Acute ethmoidal sinusitis (J012)
  • Acute frontal sinusitis (J011)
  • Acute maxillary sinusitis (J010)
  • Acute pansinusitis (J014)
  • Acute sinusitis (J01)
  • Acute sinusitis, unspecified (J019)
  • Acute sphenoidal sinusitis (J013)
  • Chronic ethmoidal sinusitis (J322)
  • Chronic frontal sinusitis (J321)
  • Chronic maxillary sinusitis (J320)
  • Chronic pansinusitis (J324)
  • Chronic sinusitis (J32)
  • Chronic sinusitis, unspecified (J329)
  • Chronic sphenoidal sinusitis (J323)
  • Other acute sinusitis (J018)
  • Other chronic sinusitis (J328)

tonsillitis

Included 3 out of 6 matching concepts.

Show matching concepts
  • Acute tonsillitis (J03)
  • Acute tonsillitis due to other specified organisms (J038)
  • Acute tonsillitis, unspecified (J039)
  • Chronic tonsillitis (J350)
  • Herpesviral gingivostomatitis and pharyngotonsillitis (B002)
  • Streptococcal tonsillitis (J030)